Research

I am broadly interested in harnessing machine learning to address pressing questions in both computational biology and chemistry with a focus on building reliable ML models from unreliable data. Some of my current research interests include:

Below are my academic publications and research contributions:

Publications

  1. Nat Commun
    Yash Chainani, Jacob Diaz, Margaret Guilarte-Silva, Vincent Blay, Quan Zhang, William Sprague, Keith E. J. Tyo, Linda J. Broadbelt, Aindrila Mukhopadhyay, Jay D. Keasling, Hector Garcia Martin & Tyler W. H. Backman
    Nature Communications, 2025.

  2. Mol Syst Des Eng
    Yash Chainani, Zhuofu Ni, Kevin M. Shebek, Linda J. Broadbelt, Keith E. J. Tyo
    Molecular Systems Design & Engineering, 2025.

  3. Curr Opin Biotechnol
    Yash Chainani, Geoffrey Bonnanzio, Keith E. J. Tyo, Linda J. Broadbelt
    Current Opinion in Biotechnology, 2023.